PeptideLookUp
Namespace: QConQuantifier
Nested types and modules
| Type | Description |
| QConcatPeptide |
Functions and values
| Function or value | Description |
copyDBIntoMemory(cn)
Signature: cn:(type) -> (type)
|
Creates a in-memory copy of the peptide data base. This speeds up the peptide look up. |
createQConcatPeptide(...)
Signature: peptideSequence:string -> modPeptideSequence:string -> modMass:float -> missCleavages:int -> globalMod:int -> QConcatPeptide
|
|
dbLookUpCn(qConCatParams)
Signature: qConCatParams:QConQuantifierParams -> (type)
|
Creates connection to local peptide data base. If no data base is present this command will create a new data base. |
initIsValidMz(...)
Signature: qConQuantParams:QConQuantifierParams -> qConCatPeps:seq<QConcatPeptide> -> float<MeasureOne> -> bool
|
Returns a function that evaluates if a given precursorMz is theoretically mapping to an ion originating from a QConcat peptide. |
initSelectModPeptideByMassRange(...)
Signature: qConCatParams:QConQuantifierParams -> cn:(type) -> float<MeasureOne> -> float<MeasureOne> -> (type) list
|
Returns a function that returns all peptides that lie within the range of value1 and value2. |
initSelectQConcatPeptideByProtAccession(...)
Signature: cn:(type) -> string -> seq<QConcatPeptide>
|
Prepares statement to select a ModSequence entry by Mass |
peptideDBParamsOf(qConCatParams)
Signature: qConCatParams:QConQuantifierParams -> (type)
|
Extracts Params for data base creation from QConcatParams. |
