Identification

Namespace: QConQuantifier

Function or value	Description
`calcPeptideSpectrumMatches(...)` Signature: reader:(type) -> lookUpF:(float<MeasureOne> -> float<MeasureOne> -> (type) list) -> calcIonSeries:((type) list -> (type)) -> qConQuantParams:QConQuantifierParams -> ms2s:(type) [] -> (type) list	Maps all fragment spectra (ms2s) and matches their spectra against in silico spectra. The insilico spectra are retrieved based on the precursor mzs of the ms2s, user supplied minimal and maximum charge states and user supplied search tolerance in ppm. The algorithm used to compare theoretical and recorded spectra is the SEQUEST algorithm.
`initCalcIonSeries qConQuantParams aal` Signature: qConQuantParams:QConQuantifierParams -> aal:(type) list -> (type)	Returns a function to perform a in silico fragmentation of any given aminoAcid list. The computed N- and C-terminal ion ladders are defined in qConQuantParams.
`thresholdPSMs qConQuantParams psms` Signature: qConQuantParams:QConQuantifierParams -> psms:(type) list -> (type) list	Filters PSMs according to the PSMThresholding case definded in qConQuantParams.